Hungary: Vas¶

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In [1]:
import datetime
import time

start = datetime.datetime.now()
print(f"Notebook executed on: {start.strftime('%d/%m/%Y %H:%M:%S%Z')} {time.tzname[time.daylight]}")
Notebook executed on: 07/03/2023 16:42:16 CEST
In [2]:
%config InlineBackend.figure_formats = ['svg']
from oscovida import *
In [3]:
overview(country="Hungary", region="Vas", weeks=5);
2023-03-07T16:42:19.697137 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec 70 70 80 80 90 90 100 100 7-day incidence rate 73.0 Vas, Hungary, last 5 weeks, last data point from 2022-12-21 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec 0 0 25 25 50 50 75 75 100 100 daily change Hungary-Vas new cases (rolling 7d mean) Hungary-Vas new cases 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec No data available to plot daily change in deaths 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec 0.8 0.8 1.0 1.0 1.2 1.2 1.4 1.4 R & growth factor (based on cases) Hungary-Vas cases daily growth factor Hungary-Vas cases daily growth factor (rolling mean) Hungary-Vas estimated R (using cases) 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec No data available to plot R & growth factor (based on deaths) 21 Nov 28 Nov 05 Dec 12 Dec 19 Dec 0 0 2000 2000 4000 4000 cases doubling time [days]
In [4]:
overview(country="Hungary", region="Vas");
2023-03-07T16:42:23.912895 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 1000 1000 2000 2000 3000 3000 4000 4000 7-day incidence rate 73.0 Vas, Hungary, last data point from 2022-12-21 May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 500 500 1000 1000 1500 1500 daily change Hungary-Vas new cases (rolling 7d mean) Hungary-Vas new cases May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 No data available to plot daily change in deaths May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.8 0.8 1.0 1.0 1.2 1.2 1.4 1.4 R & growth factor (based on cases) Hungary-Vas cases daily growth factor Hungary-Vas cases daily growth factor (rolling mean) Hungary-Vas estimated R (using cases) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 No data available to plot R & growth factor (based on deaths) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 10000 10000 20000 20000 cases doubling time [days]
In [5]:
compare_plot(country="Hungary", region="Vas");
---------------------------------------------------------------------------
TypeError                                 Traceback (most recent call last)
Cell In[5], line 1
----> 1 compare_plot(country="Hungary", region="Vas");

File /tank/oscovida/work/oscovida.github.io/oscovida.github.io/.venv/lib/python3.9/site-packages/oscovida/oscovida.py:1976, in compare_plot(country, region, subregion, savefig, normalise, dates, align)
   1974 if normalise:
   1975     _population = population(country=country, region=region, subregion=subregion)
-> 1976     c *= 100000 / _population
   1977     d *= 100000 / _population
   1979 if not subregion and not region:    # i.e. not a region of Germany

TypeError: unsupported operand type(s) for /: 'int' and 'NoneType'
In [6]:
# load the data
cases, deaths = get_region_hungary(county="Vas")

# get population of the region for future normalisation:
inhabitants = population(country="Hungary", region="Vas")
print(f'Population of country="Hungary", region="Vas": {inhabitants} people')

# compose into one table
table = compose_dataframe_summary(cases, deaths)

# show tables with up to 1000 rows
pd.set_option("display.max_rows", 1000)

# display the table
table
Population of country="Hungary", region="Vas": None people
Out[6]:
total cases daily new cases
Dátum
2022-12-21 60869 73
2022-12-14 60796 91
2022-12-07 60705 102
2022-11-30 60603 90
2022-11-23 60513 63
2022-11-16 60450 83
2022-11-09 60367 242
2022-10-26 60125 220
2022-10-19 59905 302
2022-10-12 59603 304
2022-10-05 59299 339
2022-09-28 58960 302
2022-09-21 58658 257
2022-09-14 58401 224
2022-09-07 58177 210
2022-08-31 57967 220
2022-08-24 57747 273
2022-08-17 57474 249
2022-08-10 57225 315
2022-08-03 56910 507
2022-07-27 56403 454
2022-07-20 55949 320
2022-07-13 55629 289
2022-07-06 55340 118
2022-06-29 55222 53
2022-06-22 55169 15
2022-06-15 55154 12
2022-06-08 55142 16
2022-06-01 55126 41
2022-05-25 55085 94
2022-05-18 54991 140
2022-05-11 54851 164
2022-05-02 54687 95
2022-04-28 54592 43
2022-04-27 54549 42
2022-04-26 54507 29
2022-04-25 54478 96
2022-04-22 54382 52
2022-04-21 54330 94
2022-04-20 54236 30
2022-04-19 54206 150
2022-04-14 54056 101
2022-04-13 53955 96
2022-04-12 53859 44
2022-04-11 53815 137
2022-04-08 53678 126
2022-04-06 53552 53
2022-04-05 53499 149
2022-04-01 53350 66
2022-03-31 53284 86
2022-03-30 53198 63
2022-03-29 53135 45
2022-03-28 53090 118
2022-03-25 52972 69
2022-03-24 52903 56
2022-03-23 52847 69
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2022-03-21 52756 137
2022-03-18 52619 72
2022-03-17 52547 23
2022-03-16 52524 131
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2022-03-10 52347 39
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2020-04-22 15 1
2020-04-21 14 0
2020-04-20 14 0
2020-04-19 14 0
2020-04-18 14 0
2020-04-17 14 0
2020-04-16 14 0
2020-04-15 14 0
2020-04-14 14 0
2020-04-13 14 0
2020-04-12 14 0
2020-04-11 14 1
2020-04-10 13 1
2020-04-09 12 0
2020-04-08 12 0
2020-04-07 12 1
2020-04-06 11 0
2020-04-05 11 0
2020-04-04 11 2
2020-04-03 9 0
2020-04-02 9 0
2020-04-01 9 1

Explore the data in your web browser¶

  • If you want to execute this notebook, click here to use myBinder
  • and wait (~1 to 2 minutes)
  • Then press SHIFT+RETURN to advance code cell to code cell
  • See http://jupyter.org for more details on how to use Jupyter Notebook

Acknowledgements:¶

  • Johns Hopkins University provides data for countries
  • Robert Koch Institute provides data for within Germany
  • Atlo Team for gathering and providing data from Hungary (https://atlo.team/koronamonitor/)
  • Open source and scientific computing community for the data tools
  • Github for hosting repository and html files
  • Project Jupyter for the Notebook and binder service
  • The H2020 project Photon and Neutron Open Science Cloud (PaNOSC)

In [7]:
print(f"Download of data from Johns Hopkins university: cases at {fetch_cases_last_execution()} and "
      f"deaths at {fetch_deaths_last_execution()}.")
Download of data from Johns Hopkins university: cases at 07/03/2023 09:31:22 and deaths at 07/03/2023 09:31:21.
In [8]:
# to force a fresh download of data, run "clear_cache()"
In [9]:
print(f"Notebook execution took: {datetime.datetime.now()-start}")
Notebook execution took: 0:00:08.968570