Germany: SK Jena (Thüringen)

• Homepage of project: https://oscovida.github.io
• Plots are explained at http://oscovida.github.io/plots.html
• Execute this Jupyter Notebook using myBinder

import datetime
import time

start = datetime.datetime.now()
print(f"Notebook executed on: {start.strftime('%d/%m/%Y %H:%M:%S%Z')} {time.tzname[time.daylight]}")

Notebook executed on: 07/03/2023 16:22:44 CEST

%config InlineBackend.figure_formats = ['svg']
from oscovida import *

overview(country="Germany", subregion="SK Jena", weeks=5);

overview(country="Germany", subregion="SK Jena");

compare_plot(country="Germany", subregion="SK Jena", dates="2020-03-15:");

# load the data
cases, deaths = germany_get_region(landkreis="SK Jena")

# get population of the region for future normalisation:
inhabitants = population(country="Germany", subregion="SK Jena")
print(f'Population of country="Germany", subregion="SK Jena": {inhabitants} people')

# compose into one table
table = compose_dataframe_summary(cases, deaths)

# show tables with up to 1000 rows
pd.set_option("display.max_rows", 1000)

# display the table
table

Population of country="Germany", subregion="SK Jena": 110502 people

	total cases	daily new cases	total deaths	daily new deaths
date
2023-03-06	47219	9	185	0
2023-03-03	47210	1	185	0
2023-03-02	47209	5	185	0
2023-03-01	47204	47	185	0
2023-02-27	47157	1	185	0
2023-02-24	47156	6	185	0
2023-02-23	47150	7	185	0
2023-02-22	47143	14	185	1
2023-02-21	47129	15	184	0
2023-02-20	47114	9	184	0
2023-02-17	47105	15	184	0
2023-02-16	47090	3	184	0
2023-02-15	47087	17	184	0
2023-02-14	47070	12	184	0
2023-02-13	47058	29	184	0
2023-02-10	47029	9	184	0
2023-02-09	47020	3	184	0
2023-02-08	47017	12	184	0
2023-02-07	47005	14	184	0
2023-02-06	46991	22	184	0
2023-02-03	46969	9	184	0
2023-02-02	46960	11	184	0
2023-02-01	46949	43	184	0
2023-01-31	46906	1	184	0
2023-01-30	46905	1	184	0
2023-01-27	46904	8	184	0
2023-01-26	46896	7	184	0
2023-01-25	46889	23	184	0
2023-01-24	46866	15	184	0
2023-01-23	46851	43	184	0
2023-01-21	46808	1	184	0
2023-01-18	46807	9	184	0
2023-01-17	46798	16	184	0
2023-01-16	46782	16	184	1
2023-01-13	46766	18	183	0
2023-01-12	46748	2	183	0
2023-01-11	46746	55	183	1
2023-01-09	46691	1	182	0
2023-01-06	46690	11	182	0
2023-01-05	46679	9	182	1
2023-01-04	46670	29	181	0
2023-01-03	46641	19	181	0
2023-01-02	46622	70	181	0
2022-12-30	46552	3	181	0
2022-12-29	46549	17	181	0
2022-12-28	46532	32	181	1
2022-12-27	46500	65	180	0
2022-12-23	46435	30	180	1
2022-12-22	46405	34	179	1
2022-12-21	46371	44	178	0
2022-12-20	46327	31	178	1
2022-12-19	46296	56	177	0
2022-12-18	46240	1	177	0
2022-12-16	46239	17	177	0
2022-12-15	46222	19	177	0
2022-12-14	46203	33	177	0
2022-12-13	46170	48	177	0
2022-12-12	46122	35	177	0
2022-12-11	46087	1	177	0
2022-12-09	46086	25	177	1
2022-12-08	46061	30	176	1
2022-12-07	46031	18	175	0
2022-12-06	46013	42	175	0
2022-12-05	45971	45	175	0
2022-12-04	45926	3	175	0
2022-12-02	45923	21	175	0
2022-12-01	45902	26	175	0
2022-11-30	45876	57	175	0
2022-11-29	45819	41	175	0
2022-11-28	45778	113	175	0
2022-11-25	45665	2	175	0
2022-11-24	45663	11	175	0
2022-11-23	45652	27	175	0
2022-11-22	45625	82	175	0
2022-11-18	45543	25	175	0
2022-11-17	45518	30	175	1
2022-11-16	45488	57	174	0
2022-11-15	45431	48	174	0
2022-11-14	45383	2	174	0
2022-11-11	45381	26	174	0
2022-11-10	45355	22	174	0
2022-11-09	45333	117	174	0
2022-11-08	45216	11	174	0
2022-11-07	45205	97	174	0
2022-11-04	45108	51	174	0
2022-11-03	45057	88	174	0
2022-11-02	44969	2	174	0
2022-11-01	44967	4	174	0
2022-10-29	44963	2	174	0
2022-10-28	44961	33	174	0
2022-10-27	44928	38	174	0
2022-10-26	44890	53	174	0
2022-10-25	44837	103	174	2
2022-10-24	44734	122	172	0
2022-10-23	44612	1	172	0
2022-10-21	44611	54	172	0
2022-10-20	44557	119	172	0
2022-10-19	44438	51	172	0
2022-10-18	44387	175	172	0
2022-10-17	44212	171	172	0
2022-10-15	44041	4	172	0
2022-10-14	44037	91	172	0
2022-10-13	43946	113	172	1
2022-10-12	43833	108	171	0
2022-10-11	43725	169	171	2
2022-10-10	43556	204	169	0
2022-10-09	43352	1	169	0
2022-10-08	43351	2	169	0
2022-10-07	43349	91	169	0
2022-10-06	43258	245	169	0
2022-10-05	43013	129	169	2
2022-10-04	42884	159	167	0
2022-10-03	42725	2	167	0
2022-10-02	42723	1	167	0
2022-10-01	42722	1	167	0
2022-09-30	42721	110	167	1
2022-09-29	42611	123	166	0
2022-09-28	42488	110	166	0
2022-09-27	42378	194	166	0
2022-09-26	42184	16	166	0
2022-09-23	42168	76	166	1
2022-09-22	42092	87	165	0
2022-09-21	42005	100	165	1
2022-09-20	41905	1	164	0
2022-09-19	41904	3	164	0
2022-09-17	41901	2	164	0
2022-09-16	41899	50	164	0
2022-09-15	41849	32	164	0
2022-09-14	41817	54	164	0
2022-09-13	41763	53	164	0
2022-09-12	41710	66	164	0
2022-09-11	41644	3	164	0
2022-09-10	41641	5	164	0
2022-09-09	41636	57	164	0
2022-09-08	41579	23	164	0
2022-09-07	41556	60	164	0
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2022-09-04	41349	1	164	0
2022-09-03	41348	3	164	0
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2022-09-01	41310	43	164	0
2022-08-31	41267	64	164	0
2022-08-30	41203	64	164	0
2022-08-29	41139	76	164	1
2022-08-27	41063	1	163	0
2022-08-26	41062	22	163	0
2022-08-25	41040	61	163	0
2022-08-24	40979	42	163	0
2022-08-23	40937	58	163	0
2022-08-22	40879	67	163	0
2022-08-21	40812	1	163	0
2022-08-19	40811	37	163	0
2022-08-18	40774	45	163	0
2022-08-17	40729	68	163	1
2022-08-16	40661	52	162	0
2022-08-15	40609	91	162	1
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2022-08-08	40315	76	161	0
2022-08-07	40239	1	161	0
2022-08-06	40238	1	161	0
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2022-08-04	40200	54	161	0
2022-08-03	40146	60	161	0
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2022-07-30	39896	2	161	0
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2022-07-28	39847	70	161	1
2022-07-27	39777	93	160	0
2022-07-26	39684	116	160	0
2022-07-25	39568	165	160	0
2022-07-24	39403	1	160	0
2022-07-23	39402	1	160	0
2022-07-22	39401	53	160	0
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2021-09-25	4699	17	83	0
2021-09-24	4682	6	83	0
2021-09-23	4676	26	83	0
2021-09-22	4650	16	83	0
2021-09-21	4634	3	83	0
2021-09-19	4631	5	83	0
2021-09-18	4626	10	83	0
2021-09-17	4616	8	83	0
2021-09-16	4608	18	83	0
2021-09-15	4590	11	83	0
2021-09-14	4579	10	83	0
2021-09-13	4569	2	83	0
2021-09-12	4567	5	83	0
2021-09-11	4562	7	83	0
2021-09-10	4555	9	83	0
2021-09-09	4546	8	83	0
2021-09-08	4538	13	83	0
2021-09-07	4525	21	83	0
2021-09-06	4504	5	83	0
2021-09-05	4499	2	83	0
2021-09-04	4497	6	83	0
2021-09-03	4491	13	83	0
2021-09-02	4478	7	83	0
2021-09-01	4471	10	83	0
2021-08-31	4461	4	83	0
2021-08-30	4457	2	83	0
2021-08-29	4455	3	83	0
2021-08-28	4452	2	83	0
2021-08-27	4450	2	83	0
2021-08-26	4448	3	83	0
2021-08-25	4445	9	83	0
2021-08-24	4436	5	83	0
2021-08-23	4431	3	83	0
2021-08-22	4428	1	83	0
2021-08-19	4427	3	83	0
2021-08-17	4424	5	83	0
2021-08-16	4419	1	83	0
2021-08-14	4418	2	83	0
2021-08-13	4416	4	83	0
2021-08-12	4412	1	83	0
2021-08-11	4411	3	83	0
2021-08-10	4408	3	83	0
2021-08-06	4405	7	83	0
2021-08-05	4398	1	83	0
2021-08-03	4397	1	83	0
2021-08-02	4396	2	83	0
2021-07-24	4394	2	83	0
2021-07-23	4392	3	83	0
2021-07-14	4389	1	83	0
2021-07-10	4388	1	83	0
2021-07-08	4387	3	83	0
2021-07-06	4384	1	83	0
2021-07-05	4383	1	83	0
2021-07-04	4382	1	83	0
2021-06-30	4381	1	83	0
2021-06-26	4380	1	83	0
2021-06-17	4379	1	83	0
2021-06-16	4378	2	83	0
2021-06-14	4376	1	83	0
2021-06-11	4375	3	83	0
2021-06-10	4372	2	83	0
2021-06-09	4370	1	83	0
2021-06-08	4369	2	83	0
2021-06-06	4367	1	83	0
2021-06-05	4366	1	83	0
2021-06-04	4365	3	83	0
2021-06-03	4362	2	83	0
2021-06-02	4360	3	83	0
2021-06-01	4357	9	83	0
2021-05-31	4348	3	83	0
2021-05-30	4345	1	83	0
2021-05-29	4344	2	83	0
2021-05-28	4342	5	83	0
2021-05-27	4337	3	83	0
2021-05-26	4334	7	83	0
2021-05-25	4327	1	83	0
2021-05-24	4326	1	83	0
2021-05-23	4325	1	83	1
2021-05-22	4324	8	82	0
2021-05-21	4316	3	82	0
2021-05-20	4313	13	82	0
2021-05-19	4300	4	82	0
2021-05-18	4296	25	82	3
2021-05-17	4271	8	79	1
2021-05-16	4263	2	78	0
2021-05-15	4261	6	78	0
2021-05-14	4255	9	78	0
2021-05-13	4246	6	78	0
2021-05-12	4240	16	78	0
2021-05-11	4224	34	78	1
2021-05-10	4190	5	77	0
2021-05-09	4185	3	77	0
2021-05-08	4182	21	77	0
2021-05-07	4161	14	77	0
2021-05-06	4147	13	77	0
2021-05-05	4134	21	77	0
2021-05-04	4113	36	77	1
2021-05-03	4077	11	76	0
2021-05-02	4066	14	76	0
2021-05-01	4052	34	76	0
2021-04-30	4018	20	76	0
2021-04-29	3998	20	76	1
2021-04-28	3978	34	75	1
2021-04-27	3944	45	74	0
2021-04-26	3899	4	74	0
2021-04-25	3895	13	74	1
2021-04-24	3882	14	73	1
2021-04-23	3868	29	72	0
2021-04-22	3839	20	72	2
2021-04-21	3819	23	70	1
2021-04-20	3796	43	69	0
2021-04-19	3753	20	69	0
2021-04-18	3733	8	69	0
2021-04-17	3725	25	69	0
2021-04-16	3700	22	69	0
2021-04-15	3678	24	69	0
2021-04-14	3654	32	69	0
2021-04-13	3622	25	69	0
2021-04-12	3597	11	69	0
2021-04-11	3586	3	69	1
2021-04-10	3583	20	68	0
2021-04-09	3563	34	68	0
2021-04-08	3529	45	68	0
2021-04-07	3484	52	68	0
2021-04-06	3432	17	68	0
2021-04-05	3415	5	68	1
2021-04-04	3410	5	67	0
2021-04-03	3405	10	67	0
2021-04-02	3395	33	67	0
2021-04-01	3362	19	67	0
2021-03-31	3343	17	67	0
2021-03-30	3326	47	67	0
2021-03-29	3279	9	67	0
2021-03-28	3270	14	67	0
2021-03-27	3256	21	67	1
2021-03-26	3235	32	66	1
2021-03-25	3203	11	65	0
2021-03-24	3192	18	65	0
2021-03-23	3174	25	65	0
2021-03-22	3149	4	65	0
2021-03-21	3145	3	65	0
2021-03-20	3142	7	65	0
2021-03-19	3135	13	65	0
2021-03-18	3122	31	65	0
2021-03-17	3091	9	65	0
2021-03-16	3082	15	65	1
2021-03-15	3067	2	64	0
2021-03-13	3065	8	64	0
2021-03-12	3057	10	64	0
2021-03-11	3047	9	64	0
2021-03-10	3038	14	64	0
2021-03-09	3024	19	64	0
2021-03-08	3005	7	64	0
2021-03-07	2998	5	64	0
2021-03-06	2993	5	64	0
2021-03-05	2988	16	64	0
2021-03-04	2972	8	64	0
2021-03-03	2964	23	64	0
2021-03-02	2941	10	64	0
2021-03-01	2931	4	64	0
2021-02-28	2927	2	64	0
2021-02-27	2925	5	64	0
2021-02-26	2920	7	64	0
2021-02-25	2913	11	64	0
2021-02-24	2902	21	64	1
2021-02-23	2881	9	63	0
2021-02-22	2872	3	63	0
2021-02-21	2869	4	63	1
2021-02-20	2865	7	62	0
2021-02-19	2858	11	62	0
2021-02-18	2847	25	62	1
2021-02-17	2822	13	61	0
2021-02-16	2809	19	61	0
2021-02-15	2790	1	61	0
2021-02-13	2789	9	61	1
2021-02-12	2780	14	60	0
2021-02-11	2766	16	60	0
2021-02-10	2750	9	60	0
2021-02-09	2741	10	60	0
2021-02-08	2731	2	60	0
2021-02-07	2729	3	60	0
2021-02-06	2726	13	60	0
2021-02-05	2713	19	60	1
2021-02-04	2694	29	59	0
2021-02-03	2665	27	59	0
2021-02-02	2638	34	59	0
2021-02-01	2604	4	59	0
2021-01-31	2600	6	59	0
2021-01-30	2594	10	59	0
2021-01-29	2584	22	59	0
2021-01-28	2562	10	59	1
2021-01-27	2552	28	58	2
2021-01-26	2524	20	56	0
2021-01-25	2504	22	56	1
2021-01-24	2482	1	55	0
2021-01-23	2481	16	55	0
2021-01-22	2465	28	55	1
2021-01-21	2437	8	54	0
2021-01-20	2429	50	54	1
2021-01-19	2379	46	53	2
2021-01-18	2333	3	51	0
2021-01-17	2330	13	51	0
2021-01-16	2317	20	51	1
2021-01-15	2297	43	50	0
2021-01-14	2254	43	50	0
2021-01-13	2211	46	50	2
2021-01-12	2165	33	48	0
2021-01-11	2132	23	48	1
2021-01-10	2109	13	47	0
2021-01-09	2096	22	47	0
2021-01-08	2074	40	47	0
2021-01-07	2034	42	47	0
2021-01-06	1992	31	47	0
2021-01-05	1961	73	47	0
2021-01-04	1888	16	47	0
2021-01-03	1872	11	47	0
2021-01-02	1861	24	47	2
2021-01-01	1837	18	45	0
2020-12-31	1819	33	45	1
2020-12-30	1786	51	44	1
2020-12-29	1735	54	43	1
2020-12-28	1681	14	42	0
2020-12-27	1667	2	42	0
2020-12-26	1665	14	42	2
2020-12-25	1651	28	40	1
2020-12-24	1623	18	39	0
2020-12-23	1605	127	39	3
2020-12-22	1478	41	36	2
2020-12-21	1437	68	34	1
2020-12-20	1369	14	33	0
2020-12-19	1355	33	33	0
2020-12-18	1322	42	33	0
2020-12-17	1280	45	33	1
2020-12-16	1235	36	32	2
2020-12-15	1199	33	30	0
2020-12-14	1166	7	30	1
2020-12-13	1159	11	29	1
2020-12-12	1148	81	28	3
2020-12-11	1067	32	25	0
2020-12-10	1035	33	25	0
2020-12-09	1002	53	25	0
2020-12-08	949	25	25	4
2020-12-07	924	9	21	0
2020-12-06	915	28	21	0
2020-12-05	887	7	21	2
2020-12-04	880	27	19	0
2020-12-03	853	19	19	0
2020-12-02	834	28	19	0
2020-12-01	806	20	19	1
2020-11-30	786	12	18	0
2020-11-29	774	3	18	0
2020-11-28	771	9	18	1
2020-11-27	762	22	17	3
2020-11-26	740	26	14	0
2020-11-25	714	25	14	1
2020-11-24	689	23	13	1
2020-11-23	666	11	12	1
2020-11-22	655	7	11	1
2020-11-21	648	11	10	0
2020-11-20	637	17	10	0
2020-11-19	620	18	10	0
2020-11-18	602	15	10	1
2020-11-17	587	15	9	0
2020-11-16	572	22	9	4
2020-11-15	550	3	5	0
2020-11-14	547	11	5	0
2020-11-13	536	15	5	0
2020-11-12	521	24	5	0
2020-11-11	497	13	5	0
2020-11-10	484	18	5	0
2020-11-09	466	12	5	0
2020-11-08	454	2	5	0
2020-11-07	452	1	5	0
2020-11-06	451	12	5	0
2020-11-05	439	16	5	0
2020-11-04	423	8	5	0
2020-11-03	415	11	5	0
2020-11-02	404	10	5	0
2020-10-31	394	6	5	0
2020-10-30	388	18	5	0
2020-10-29	370	14	5	0
2020-10-28	356	15	5	0
2020-10-27	341	5	5	0
2020-10-26	336	9	5	0
2020-10-25	327	2	5	0
2020-10-24	325	17	5	0
2020-10-23	308	4	5	0
2020-10-22	304	7	5	0
2020-10-21	297	13	5	0
2020-10-20	284	10	5	1
2020-10-19	274	9	4	0
2020-10-17	265	1	4	0
2020-10-16	264	8	4	0
2020-10-15	256	1	4	0
2020-10-13	255	4	4	0
2020-10-12	251	4	4	0
2020-10-10	247	4	4	0
2020-10-09	243	3	4	0
2020-10-08	240	3	4	0
2020-10-07	237	8	4	1
2020-10-06	229	1	3	0
2020-10-05	228	1	3	0
2020-10-04	227	2	3	0
2020-10-03	225	3	3	0
2020-10-02	222	3	3	0
2020-10-01	219	3	3	0
2020-09-29	216	4	3	0
2020-09-28	212	1	3	0
2020-09-26	211	1	3	0
2020-09-24	210	2	3	0
2020-09-22	208	2	3	0
2020-09-21	206	7	3	0
2020-09-18	199	2	3	0
2020-09-17	197	1	3	0
2020-09-16	196	2	3	0
2020-09-14	194	2	3	0
2020-09-12	192	1	3	0
2020-09-11	191	3	3	0
2020-09-10	188	3	3	0
2020-09-09	185	3	3	0
2020-09-04	182	4	3	0
2020-09-02	178	2	3	0
2020-09-01	176	1	3	0
2020-08-31	175	1	3	0
2020-08-28	174	3	3	0
2020-08-27	171	1	3	0
2020-08-25	170	3	3	0
2020-08-20	167	1	3	0
2020-08-19	166	1	3	0
2020-08-18	165	1	3	0
2020-08-11	164	1	3	0
2020-08-10	163	1	3	0
2020-07-12	162	1	3	0
2020-07-11	161	1	3	0
2020-06-12	160	1	3	0
2020-05-30	159	1	3	0
2020-05-12	158	1	3	0
2020-04-25	157	1	3	0
2020-04-23	156	2	3	0
2020-04-12	154	1	3	0
2020-04-09	153	3	3	0
2020-04-08	150	3	3	0
2020-04-07	147	5	3	0
2020-04-06	142	1	3	0
2020-04-05	141	3	3	0
2020-04-04	138	4	3	0
2020-04-03	134	4	3	0
2020-04-02	130	5	3	1
2020-04-01	125	4	2	1
2020-03-31	121	3	1	0
2020-03-30	118	3	1	0
2020-03-29	115	2	1	0
2020-03-28	113	15	1	0
2020-03-27	98	3	1	0
2020-03-26	95	4	1	0
2020-03-25	91	4	1	0
2020-03-24	87	2	1	0
2020-03-23	85	5	1	0
2020-03-22	80	9	1	0
2020-03-21	71	10	1	0
2020-03-20	61	22	1	1
2020-03-19	39	10	0	0
2020-03-18	29	7	0	0
2020-03-17	22	11	0	0
2020-03-16	11	3	0	0

Explore the data in your web browser

• If you want to execute this notebook, click here to use myBinder
• and wait (~1 to 2 minutes)
• Then press SHIFT+RETURN to advance code cell to code cell
• See http://jupyter.org for more details on how to use Jupyter Notebook

Acknowledgements:

• Johns Hopkins University provides data for countries
• Robert Koch Institute provides data for within Germany
• Atlo Team for gathering and providing data from Hungary (https://atlo.team/koronamonitor/)
• Open source and scientific computing community for the data tools
• Github for hosting repository and html files
• Project Jupyter for the Notebook and binder service
• The H2020 project Photon and Neutron Open Science Cloud (PaNOSC)

---

print(f"Download of data from Johns Hopkins university: cases at {fetch_cases_last_execution()} and "
      f"deaths at {fetch_deaths_last_execution()}.")

Download of data from Johns Hopkins university: cases at 07/03/2023 09:31:22 and deaths at 07/03/2023 09:31:21.

# to force a fresh download of data, run "clear_cache()"

print(f"Notebook execution took: {datetime.datetime.now()-start}")

Notebook execution took: 0:01:47.148505