Germany: Region Hannover (Niedersachsen)¶

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In [1]:
import datetime
import time

start = datetime.datetime.now()
print(f"Notebook executed on: {start.strftime('%d/%m/%Y %H:%M:%S%Z')} {time.tzname[time.daylight]}")
Notebook executed on: 07/03/2023 13:38:39 CEST
In [2]:
%config InlineBackend.figure_formats = ['svg']
from oscovida import *
In [3]:
overview(country="Germany", subregion="Region Hannover", weeks=5);
2023-03-07T13:38:53.284105 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 100 100 120 120 140 140 7-day incidence rate (per 100K people) 85.7 Region Hannover, Germany, last 5 weeks, last data point from 2023-03-06 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 10 20 30 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.00 0.05 0.10 0.15 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-Region Hannover cases daily growth factor Germany-Region Hannover cases daily growth factor (rolling mean) Germany-Region Hannover estimated R (using cases) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.0 0.0 0.5 0.5 1.0 1.0 1.5 1.5 2.0 2.0 R & growth factor (based on deaths) Germany-Region Hannover deaths daily growth factor Germany-Region Hannover deaths daily growth factor (rolling mean) Germany-Region Hannover estimated R (using deaths) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 1000 2000 3000 4000 cases doubling time [days] Germany-Region Hannover doubling time cases (rolling mean) Germany-Region Hannover doubling time deaths (rolling mean) 0.0 115.8 231.5 347.3 daily change Germany-Region Hannover new cases (rolling 7d mean) Germany-Region Hannover new cases 0.000 0.579 1.158 1.736 daily change Germany-Region Hannover new deaths (rolling 7d mean) Germany-Region Hannover new deaths 0 386 772 1158 1544 deaths doubling time [days]
In [4]:
overview(country="Germany", subregion="Region Hannover");
2023-03-07T13:39:10.737922 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 1000 1000 2000 2000 7-day incidence rate (per 100K people) 85.7 Region Hannover, Germany, last data point from 2023-03-06 May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 100 200 300 400 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.0 0.5 1.0 1.5 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-Region Hannover cases daily growth factor Germany-Region Hannover cases daily growth factor (rolling mean) Germany-Region Hannover estimated R (using cases) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.0 0.0 0.5 0.5 1.0 1.0 1.5 1.5 2.0 2.0 R & growth factor (based on deaths) Germany-Region Hannover deaths daily growth factor Germany-Region Hannover deaths daily growth factor (rolling mean) Germany-Region Hannover estimated R (using deaths) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 2000 4000 6000 8000 cases doubling time [days] Germany-Region Hannover doubling time cases (rolling mean) Germany-Region Hannover doubling time deaths (rolling mean) 0 1158 2315 3473 4630 daily change Germany-Region Hannover new cases (rolling 7d mean) Germany-Region Hannover new cases 0.00 5.79 11.58 17.36 daily change Germany-Region Hannover new deaths (rolling 7d mean) Germany-Region Hannover new deaths 0 585 1170 1755 2340 deaths doubling time [days]
In [5]:
compare_plot(country="Germany", subregion="Region Hannover", dates="2020-03-15:");
2023-03-07T13:41:10.557578 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.1 0.1 1 1 10 10 100 100 daily new cases (rolling 7-day mean) normalised by 100K people Daily cases (top) and deaths (below) for Germany: Region Hannover Region Hannover Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.001 0.001 0.01 0.01 0.1 0.1 1 1 daily new deaths (rolling 7-day mean) normalised by 100K people Region Hannover Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt
In [6]:
# load the data
cases, deaths = germany_get_region(landkreis="Region Hannover")

# get population of the region for future normalisation:
inhabitants = population(country="Germany", subregion="Region Hannover")
print(f'Population of country="Germany", subregion="Region Hannover": {inhabitants} people')

# compose into one table
table = compose_dataframe_summary(cases, deaths)

# show tables with up to 1000 rows
pd.set_option("display.max_rows", 1000)

# display the table
table
Population of country="Germany", subregion="Region Hannover": 1157541 people
Out[6]:
total cases daily new cases total deaths daily new deaths
date
2023-03-06 533430 74 2283 0
2023-03-05 533356 31 2283 0
2023-03-04 533325 45 2283 1
2023-03-03 533280 104 2282 0
2023-03-02 533176 144 2282 0
... ... ... ... ...
2020-03-08 8 2 0 0
2020-03-07 6 1 0 0
2020-03-06 5 2 0 0
2020-03-04 3 1 0 0
2020-03-03 2 1 0 0

1055 rows × 4 columns

Explore the data in your web browser¶

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Acknowledgements:¶

  • Johns Hopkins University provides data for countries
  • Robert Koch Institute provides data for within Germany
  • Atlo Team for gathering and providing data from Hungary (https://atlo.team/koronamonitor/)
  • Open source and scientific computing community for the data tools
  • Github for hosting repository and html files
  • Project Jupyter for the Notebook and binder service
  • The H2020 project Photon and Neutron Open Science Cloud (PaNOSC)

In [7]:
print(f"Download of data from Johns Hopkins university: cases at {fetch_cases_last_execution()} and "
      f"deaths at {fetch_deaths_last_execution()}.")
Download of data from Johns Hopkins university: cases at 07/03/2023 09:31:22 and deaths at 07/03/2023 09:31:21.
In [8]:
# to force a fresh download of data, run "clear_cache()"
In [9]:
print(f"Notebook execution took: {datetime.datetime.now()-start}")
Notebook execution took: 0:02:53.912969