Germany: LK Offenbach (Hessen)¶

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In [1]:
import datetime
import time

start = datetime.datetime.now()
print(f"Notebook executed on: {start.strftime('%d/%m/%Y %H:%M:%S%Z')} {time.tzname[time.daylight]}")
Notebook executed on: 07/03/2023 12:44:21 CEST
In [2]:
%config InlineBackend.figure_formats = ['svg']
from oscovida import *
In [3]:
overview(country="Germany", subregion="LK Offenbach", weeks=5);
2023-03-07T12:44:32.749423 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 80 80 100 100 120 120 140 140 7-day incidence rate (per 100K people) 75.0 LK Offenbach, Germany, last 5 weeks, last data point from 2023-03-06 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 10 20 30 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.0 0.2 0.4 0.6 0.8 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.6 0.6 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-LK Offenbach cases daily growth factor Germany-LK Offenbach cases daily growth factor (rolling mean) Germany-LK Offenbach estimated R (using cases) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 1 1 2 2 3 3 R & growth factor (based on deaths) Germany-LK Offenbach deaths daily growth factor Germany-LK Offenbach deaths daily growth factor (rolling mean) Germany-LK Offenbach estimated R (using deaths) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 2000 4000 cases doubling time [days] Germany-LK Offenbach doubling time cases (rolling mean) Germany-LK Offenbach doubling time deaths (rolling mean) 0.0 35.7 71.5 107.2 daily change Germany-LK Offenbach new cases (rolling 7d mean) Germany-LK Offenbach new cases 0.000 0.715 1.430 2.145 2.860 daily change Germany-LK Offenbach new deaths (rolling 7d mean) Germany-LK Offenbach new deaths 0 354 708 deaths doubling time [days]
In [4]:
overview(country="Germany", subregion="LK Offenbach");
2023-03-07T12:44:54.901661 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 1000 1000 2000 2000 7-day incidence rate (per 100K people) 75.0 LK Offenbach, Germany, last data point from 2023-03-06 May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 200 400 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 2 4 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.6 0.6 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-LK Offenbach cases daily growth factor Germany-LK Offenbach cases daily growth factor (rolling mean) Germany-LK Offenbach estimated R (using cases) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 1 1 2 2 3 3 R & growth factor (based on deaths) Germany-LK Offenbach deaths daily growth factor Germany-LK Offenbach deaths daily growth factor (rolling mean) Germany-LK Offenbach estimated R (using deaths) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 2000 4000 6000 cases doubling time [days] Germany-LK Offenbach doubling time cases (rolling mean) Germany-LK Offenbach doubling time deaths (rolling mean) 0 715 1430 daily change Germany-LK Offenbach new cases (rolling 7d mean) Germany-LK Offenbach new cases 0.00 7.15 14.30 daily change Germany-LK Offenbach new deaths (rolling 7d mean) Germany-LK Offenbach new deaths 0 374 747 1121 deaths doubling time [days]
In [5]:
compare_plot(country="Germany", subregion="LK Offenbach", dates="2020-03-15:");
2023-03-07T12:46:55.569838 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.1 0.1 1 1 10 10 100 100 daily new cases (rolling 7-day mean) normalised by 100K people Daily cases (top) and deaths (below) for Germany: LK Offenbach LK Offenbach Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.001 0.001 0.01 0.01 0.1 0.1 1 1 daily new deaths (rolling 7-day mean) normalised by 100K people LK Offenbach Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt
In [6]:
# load the data
cases, deaths = germany_get_region(landkreis="LK Offenbach")

# get population of the region for future normalisation:
inhabitants = population(country="Germany", subregion="LK Offenbach")
print(f'Population of country="Germany", subregion="LK Offenbach": {inhabitants} people')

# compose into one table
table = compose_dataframe_summary(cases, deaths)

# show tables with up to 1000 rows
pd.set_option("display.max_rows", 1000)

# display the table
table
Population of country="Germany", subregion="LK Offenbach": 357466 people
Out[6]:
total cases daily new cases total deaths daily new deaths
date
2023-03-06 165575 43 918 0
2023-03-03 165532 32 918 1
2023-03-02 165500 26 917 0
2023-03-01 165474 63 917 0
2023-02-28 165411 104 917 0
2023-02-27 165307 142 917 1
2023-02-24 165165 82 916 1
2023-02-23 165083 112 915 1
2023-02-22 164971 103 914 1
2023-02-21 164868 99 913 0
2023-02-20 164769 111 913 2
2023-02-19 164658 3 911 1
2023-02-17 164655 90 910 3
2023-02-16 164565 72 907 1
2023-02-15 164493 95 906 0
2023-02-14 164398 90 906 0
2023-02-13 164308 93 906 1
2023-02-10 164215 62 905 0
2023-02-09 164153 55 905 0
2023-02-08 164098 97 905 1
2023-02-07 164001 62 904 0
2023-02-06 163939 80 904 0
2023-02-03 163859 52 904 0
2023-02-02 163807 47 904 0
2023-02-01 163760 76 904 0
2023-01-31 163684 85 904 0
2023-01-30 163599 76 904 0
2023-01-27 163523 53 904 0
2023-01-26 163470 58 904 1
2023-01-25 163412 60 903 0
2023-01-24 163352 52 903 0
2023-01-23 163300 75 903 0
2023-01-20 163225 40 903 0
2023-01-19 163185 50 903 0
2023-01-18 163135 46 903 0
2023-01-17 163089 42 903 0
2023-01-16 163047 105 903 1
2023-01-13 162942 39 902 0
2023-01-12 162903 52 902 1
2023-01-11 162851 81 901 1
2023-01-10 162770 84 900 0
2023-01-09 162686 138 900 0
2023-01-08 162548 1 900 0
2023-01-06 162547 65 900 0
2023-01-05 162482 64 900 2
2023-01-04 162418 103 898 0
2023-01-03 162315 101 898 0
2023-01-02 162214 161 898 3
2022-12-31 162053 1 895 0
2022-12-30 162052 111 895 1
2022-12-29 161941 149 894 2
2022-12-28 161792 124 892 0
2022-12-27 161668 352 892 4
2022-12-23 161316 183 888 0
2022-12-22 161133 175 888 1
2022-12-21 160958 140 887 1
2022-12-20 160818 146 886 1
2022-12-19 160672 272 885 3
2022-12-18 160400 1 882 0
2022-12-16 160399 116 882 1
2022-12-15 160283 119 881 1
2022-12-14 160164 141 880 0
2022-12-13 160023 156 880 1
2022-12-12 159867 223 879 1
2022-12-10 159644 1 878 0
2022-12-09 159643 142 878 0
2022-12-08 159501 90 878 1
2022-12-07 159411 120 877 1
2022-12-06 159291 134 876 0
2022-12-05 159157 193 876 1
2022-12-02 158964 86 875 0
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2022-11-30 158772 117 875 0
2022-11-29 158655 114 875 1
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2022-11-21 157880 222 874 0
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2022-11-17 157566 94 874 0
2022-11-16 157472 164 874 1
2022-11-15 157308 133 873 0
2022-11-14 157175 277 873 2
2022-11-13 156898 1 871 0
2022-11-11 156897 113 871 0
2022-11-10 156784 169 871 0
2022-11-09 156615 124 871 1
2022-11-08 156491 180 870 1
2022-11-07 156311 335 869 1
2022-11-06 155976 3 868 0
2022-11-04 155973 139 868 1
2022-11-03 155834 160 867 1
2022-11-02 155674 190 866 1
2022-11-01 155484 270 865 2
2022-10-31 155214 426 863 0
2022-10-28 154788 183 863 0
2022-10-27 154605 227 863 1
2022-10-26 154378 249 862 0
2022-10-25 154129 401 862 1
2022-10-24 153728 584 861 4
2022-10-21 153144 344 857 0
2022-10-20 152800 364 857 0
2022-10-19 152436 425 857 2
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2022-10-17 151387 812 853 1
2022-10-16 150575 2 852 0
2022-10-15 150573 3 852 1
2022-10-14 150570 424 851 1
2022-10-13 150146 457 850 1
2022-10-12 149689 583 849 6
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2022-10-10 148294 902 836 0
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2022-10-06 146868 705 835 0
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2022-10-04 145300 810 832 2
2022-10-01 144490 1 830 0
2022-09-30 144489 342 830 0
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2022-09-28 143803 407 830 1
2022-09-27 143396 546 829 0
2022-09-26 142850 491 829 2
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2022-09-21 141980 250 827 0
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2022-09-12 140356 274 824 0
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2022-09-06 139633 201 824 1
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Explore the data in your web browser¶

  • If you want to execute this notebook, click here to use myBinder
  • and wait (~1 to 2 minutes)
  • Then press SHIFT+RETURN to advance code cell to code cell
  • See http://jupyter.org for more details on how to use Jupyter Notebook

Acknowledgements:¶

  • Johns Hopkins University provides data for countries
  • Robert Koch Institute provides data for within Germany
  • Atlo Team for gathering and providing data from Hungary (https://atlo.team/koronamonitor/)
  • Open source and scientific computing community for the data tools
  • Github for hosting repository and html files
  • Project Jupyter for the Notebook and binder service
  • The H2020 project Photon and Neutron Open Science Cloud (PaNOSC)

In [7]:
print(f"Download of data from Johns Hopkins university: cases at {fetch_cases_last_execution()} and "
      f"deaths at {fetch_deaths_last_execution()}.")
Download of data from Johns Hopkins university: cases at 07/03/2023 09:31:22 and deaths at 07/03/2023 09:31:21.
In [8]:
# to force a fresh download of data, run "clear_cache()"
In [9]:
print(f"Notebook execution took: {datetime.datetime.now()-start}")
Notebook execution took: 0:02:48.399077