Germany: SK Berlin Tempelhof-Schöneberg (Berlin)¶

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In [1]:
import datetime
import time

start = datetime.datetime.now()
print(f"Notebook executed on: {start.strftime('%d/%m/%Y %H:%M:%S%Z')} {time.tzname[time.daylight]}")
Notebook executed on: 07/03/2023 12:06:50 CEST
In [2]:
%config InlineBackend.figure_formats = ['svg']
from oscovida import *
In [3]:
overview(country="Germany", subregion="SK Berlin Tempelhof-Schöneberg", weeks=5);
2023-03-07T12:07:08.191726 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 50 50 60 60 70 70 80 80 90 90 7-day incidence rate (per 100K people) 46.2 SK Berlin Tempelhof-Schöneberg, Germany, last 5 weeks, last data point from 2023-03-06 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 10 20 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.0 0.2 0.4 daily change normalised per 100K 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-SK Berlin Tempelhof-Schöneberg cases daily growth factor Germany-SK Berlin Tempelhof-Schöneberg cases daily growth factor (rolling mean) Germany-SK Berlin Tempelhof-Schöneberg estimated R (using cases) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0.0 0.0 2.5 2.5 5.0 5.0 7.5 7.5 10.0 10.0 R & growth factor (based on deaths) Germany-SK Berlin Tempelhof-Schöneberg deaths daily growth factor Germany-SK Berlin Tempelhof-Schöneberg deaths daily growth factor (rolling mean) Germany-SK Berlin Tempelhof-Schöneberg estimated R (using deaths) 30 Jan 06 Feb 13 Feb 20 Feb 27 Feb 06 Mar 0 2000 4000 cases doubling time [days] Germany-SK Berlin Tempelhof-Schöneberg doubling time cases (rolling mean) 0.0 34.2 68.5 daily change Germany-SK Berlin Tempelhof-Schöneberg new cases (rolling 7d mean) Germany-SK Berlin Tempelhof-Schöneberg new cases 0.000 0.685 1.369 daily change Germany-SK Berlin Tempelhof-Schöneberg new deaths (rolling 7d mean) Germany-SK Berlin Tempelhof-Schöneberg new deaths 0.000 0.336 0.672
In [4]:
overview(country="Germany", subregion="SK Berlin Tempelhof-Schöneberg");
2023-03-07T12:07:28.067666 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 0 1000 1000 2000 2000 3000 3000 7-day incidence rate (per 100K people) 46.2 SK Berlin Tempelhof-Schöneberg, Germany, last data point from 2023-03-06 May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 200 400 600 800 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 2 4 6 daily change normalised per 100K May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.8 0.8 1.0 1.0 1.2 1.2 R & growth factor (based on cases) Germany-SK Berlin Tempelhof-Schöneberg cases daily growth factor Germany-SK Berlin Tempelhof-Schöneberg cases daily growth factor (rolling mean) Germany-SK Berlin Tempelhof-Schöneberg estimated R (using cases) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0.0 0.0 2.5 2.5 5.0 5.0 7.5 7.5 10.0 10.0 R & growth factor (based on deaths) Germany-SK Berlin Tempelhof-Schöneberg deaths daily growth factor Germany-SK Berlin Tempelhof-Schöneberg deaths daily growth factor (rolling mean) Germany-SK Berlin Tempelhof-Schöneberg estimated R (using deaths) May 20 Sep 20 Jan 21 May 21 Sep 21 Jan 22 May 22 Sep 22 Jan 23 0 5000 10000 cases doubling time [days] Germany-SK Berlin Tempelhof-Schöneberg doubling time cases (rolling mean) Germany-SK Berlin Tempelhof-Schöneberg doubling time deaths (rolling mean) 0 685 1369 2054 2738 daily change Germany-SK Berlin Tempelhof-Schöneberg new cases (rolling 7d mean) Germany-SK Berlin Tempelhof-Schöneberg new cases 0.00 6.85 13.69 20.54 daily change Germany-SK Berlin Tempelhof-Schöneberg new deaths (rolling 7d mean) Germany-SK Berlin Tempelhof-Schöneberg new deaths 0 345 691 deaths doubling time [days]
In [5]:
compare_plot(country="Germany", subregion="SK Berlin Tempelhof-Schöneberg", dates="2020-03-15:");
2023-03-07T12:09:36.354614 image/svg+xml Matplotlib v3.7.1, https://matplotlib.org/ 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.1 0.1 1 1 10 10 100 100 daily new cases (rolling 7-day mean) normalised by 100K people Daily cases (top) and deaths (below) for Germany: SK Berlin Tempelhof-Schöneberg SK Berlin Tempelhof-Schöneberg Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt 2020-05 2020-09 2021-01 2021-05 2021-09 2022-01 2022-05 2022-09 2023-01 0.001 0.001 0.01 0.01 0.1 0.1 1 1 daily new deaths (rolling 7-day mean) normalised by 100K people SK Berlin Tempelhof-Schöneberg Bayern Berlin Bremen Hamburg Hessen Nordrhein-Westfalen Sachsen-Anhalt
In [6]:
# load the data
cases, deaths = germany_get_region(landkreis="SK Berlin Tempelhof-Schöneberg")

# get population of the region for future normalisation:
inhabitants = population(country="Germany", subregion="SK Berlin Tempelhof-Schöneberg")
print(f'Population of country="Germany", subregion="SK Berlin Tempelhof-Schöneberg": {inhabitants} people')

# compose into one table
table = compose_dataframe_summary(cases, deaths)

# show tables with up to 1000 rows
pd.set_option("display.max_rows", 1000)

# display the table
table
Population of country="Germany", subregion="SK Berlin Tempelhof-Schöneberg": 342285 people
Out[6]:
total cases daily new cases total deaths daily new deaths
date
2023-03-03 131919 16 677 0
2023-03-02 131903 31 677 0
2023-03-01 131872 52 677 0
2023-02-28 131820 59 677 0
2023-02-27 131761 89 677 0
2023-02-24 131672 38 677 0
2023-02-23 131634 41 677 0
2023-02-22 131593 41 677 0
2023-02-21 131552 56 677 0
2023-02-20 131496 65 677 0
2023-02-17 131431 47 677 0
2023-02-16 131384 42 677 0
2023-02-15 131342 65 677 2
2023-02-14 131277 54 675 0
2023-02-13 131223 67 675 1
2023-02-10 131156 81 674 0
2023-02-09 131075 37 674 0
2023-02-08 131038 44 674 0
2023-02-07 130994 54 674 0
2023-02-06 130940 56 674 0
2023-02-03 130884 30 674 1
2023-02-02 130854 33 673 0
2023-02-01 130821 42 673 0
2023-01-31 130779 46 673 0
2023-01-30 130733 51 673 1
2023-01-27 130682 32 672 0
2023-01-26 130650 36 672 0
2023-01-25 130614 31 672 0
2023-01-24 130583 50 672 0
2023-01-23 130533 66 672 0
2023-01-20 130467 35 672 0
2023-01-19 130432 19 672 0
2023-01-18 130413 42 672 1
2023-01-17 130371 58 671 0
2023-01-16 130313 79 671 1
2023-01-14 130234 1 670 0
2023-01-13 130233 31 670 2
2023-01-12 130202 41 668 0
2023-01-11 130161 55 668 0
2023-01-10 130106 50 668 0
2023-01-09 130056 120 668 0
2023-01-06 129936 47 668 0
2023-01-05 129889 81 668 2
2023-01-04 129808 96 666 1
2023-01-03 129712 127 665 2
2023-01-02 129585 152 663 0
2022-12-30 129433 103 663 1
2022-12-29 129330 130 662 2
2022-12-28 129200 129 660 0
2022-12-27 129071 349 660 2
2022-12-24 128722 2 658 0
2022-12-23 128720 153 658 0
2022-12-22 128567 147 658 0
2022-12-21 128420 183 658 0
2022-12-20 128237 198 658 0
2022-12-19 128039 303 658 1
2022-12-17 127736 1 657 0
2022-12-16 127735 191 657 2
2022-12-15 127544 109 655 1
2022-12-14 127435 262 654 3
2022-12-13 127173 218 651 1
2022-12-12 126955 352 650 4
2022-12-09 126603 163 646 0
2022-12-08 126440 136 646 1
2022-12-07 126304 140 645 1
2022-12-06 126164 187 644 0
2022-12-05 125977 294 644 1
2022-12-02 125683 196 643 3
2022-12-01 125487 113 640 0
2022-11-30 125374 124 640 1
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2022-11-28 125045 254 638 2
2022-11-25 124791 131 636 1
2022-11-24 124660 104 635 1
2022-11-23 124556 130 634 1
2022-11-22 124426 113 633 0
2022-11-21 124313 166 633 1
2022-11-18 124147 180 632 2
2022-11-17 123967 86 630 1
2022-11-16 123881 3 629 0
2022-11-15 123878 166 629 0
2022-11-14 123712 155 629 2
2022-11-13 123557 1 627 0
2022-11-11 123556 91 627 0
2022-11-10 123465 72 627 2
2022-11-09 123393 153 625 0
2022-11-08 123240 122 625 2
2022-11-07 123118 198 623 0
2022-11-04 122920 127 623 0
2022-11-03 122793 111 623 2
2022-11-02 122682 124 621 0
2022-11-01 122558 173 621 2
2022-10-31 122385 289 619 1
2022-10-29 122096 1 618 0
2022-10-28 122095 136 618 0
2022-10-27 121959 135 618 0
2022-10-26 121824 236 618 1
2022-10-25 121588 233 617 1
2022-10-24 121355 335 616 1
2022-10-23 121020 1 615 0
2022-10-22 121019 1 615 0
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2022-09-09 113847 94 596 0
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Explore the data in your web browser¶

  • If you want to execute this notebook, click here to use myBinder
  • and wait (~1 to 2 minutes)
  • Then press SHIFT+RETURN to advance code cell to code cell
  • See http://jupyter.org for more details on how to use Jupyter Notebook

Acknowledgements:¶

  • Johns Hopkins University provides data for countries
  • Robert Koch Institute provides data for within Germany
  • Atlo Team for gathering and providing data from Hungary (https://atlo.team/koronamonitor/)
  • Open source and scientific computing community for the data tools
  • Github for hosting repository and html files
  • Project Jupyter for the Notebook and binder service
  • The H2020 project Photon and Neutron Open Science Cloud (PaNOSC)

In [7]:
print(f"Download of data from Johns Hopkins university: cases at {fetch_cases_last_execution()} and "
      f"deaths at {fetch_deaths_last_execution()}.")
Download of data from Johns Hopkins university: cases at 07/03/2023 09:31:22 and deaths at 07/03/2023 09:31:21.
In [8]:
# to force a fresh download of data, run "clear_cache()"
In [9]:
print(f"Notebook execution took: {datetime.datetime.now()-start}")
Notebook execution took: 0:03:04.136292